Hyperlinked bibliography

Chapter 1 - Chapter 2 - Chapter 3 - Chapter 4 - Chapter 5 - Chapter 6 - Chapter 7 - Chapter 8 - Chapter 9 - Chapter 10 - Chapter 12 - Chapter 14 - Chapter 15

Click on the links below to view the references from the book with active links to online journal articles, where available. Please note that some of the sites you will be directed to from this page require a username and password to access the article. You may need to contact your library to obtain login details.

Please note that only chapters with suitable references are included here.

Chapter 1

McShea, D. W. 1996 Metazoan complexity and evolution: Is there a trend? Evolution 50: 477-92 [DOI: 10.2307/2410824].

Chapter 2

Arrigo, K. R. 2005 Marine microorganisms and global nutrient cycles. Nature, 437: 349-355 [DOI: 10.1038/nature04159] [PubMed: 16163345].

Broecker, W. 2009 Wally’s quest to understand the oceans CaCO3 cycle. Annual Review of Marine. Science, 1: 1-18. https://doi.org/10.1146/annurev.marine.010908.163936

Falkowski, P. G., Katz, M. E., Knoll, A. H., Quigg, A., & Raven, J. A. 2004 The evolution of modern eukaryotic phytoplankton. Science 305: 354-360 [DOI: 10.1126/science.1095964] [PubMed: 15256663].

Fogg, G. E. 1991 Tansley Review No. 30. The phytoplankton ways of life. New Phytologist 118: 191-232. [DOI: 10.1111/j.1469-8137.1991.tb00974.x]

Smetacek, V. 2002 The ocean’s veil. Nature 419: 565 [DOI: 10.1038/419565a] [PubMed: 12374956].

Smetacek, V. 2001 A watery arms race. Nature 411: 745 [DOI: 10.1038/35081210] [PubMed: 11459035].

Smetacek, V. 1999 Revolution in the ocean. Nature 401: 647 [DOI: 10.1038/44281].

Chapter 3

Arrigo K. 2005 Marine micro-organisms and global nutrient cycles. Nature 437: 349-355 [DOI: 10.1038/nature04159] [PubMed: 16163345].

Bowler, C., Karl, D. M., & Colwell, R. R. 2009 Microbial oceanography in the sea of opportunity. Nature, 459: 180-184 [DOI: 10.1038/nature08056] [PubMed: 19444203].

Caron, D. A., Worden, A. Z., Countway, P. D., Demir, E., & Heidelberg, K. B. 2009 Protists are microbes too: a perspective. ISME Journal, 3: 4-12 [DOI: 10.1038/ismej.2008.101] [PubMed: 19005497].

DeLong, E. F. 2009 The microbial ocean from genomes to biomes. Nature 459: 200-206 [DOI: 10.1038/nature08059] [PubMed: 19444206].

DeLong, E. F. & D. M. Karl 2005. Genomic perspectives in microbial oceanography. Nature, 437: 336-342 [DOI: 10.1038/nature04157] [PubMed: 16163343].

Fuhrman J. A. 2009 Microbial community structure and its functional implications. Nature 459: 193-199 [DOI: 10.1038/nature08058] [PubMed: 19444205].

Giovannoni, S. J. & U. Stingl 2005. Molecular diversity and ecology of microbial plankton. Nature, 437: 343-348 [DOI: 10.1038/nature04275] [PubMed: 16163344].

Legendre, L. & Rassoulzadegan, F. 1995 Plankton and nutrient dynamics in marine waters. Ophelia 41:153-72. [DOI: 10.1080/00785236.1995.10422042]

Moran, M. A. & Armbrust, E. V. 2007 Genomes of Sea Microbes. Oceanography, 20: 47-55. [DOI: 10.5670/oceanog.2007.47]

Pomeroy, L. R. 1974 The ocean’s food web, a changing paradigm. Bioscience 24: 499-504 [PubMed: 4433253,4376183,4408063,4467900].

Suttle, C. A. 2005 Viruses in the sea. Nature, 437: 356-361 [DOI: 10.1038/nature04160] [PubMed: 16163346].

Chapter 4

Brey, T. 2008 Population Dynamics in Benthic Invertebrates. A Virtual Handbook, Version 01.2 (http://www.thomas-brey.de/science/virtualhandbook/navlog/index.html). Alfred Wegener Institute for Polar and Marine Research, Germany.

Chapter 5

Attrill, M. J. & S. D. Rundle 2002. Ecotone or ecocline: ecological boundaries in estuaries. Estuar. Coast. Shelf Sci 55: 929-36 [DOI: 10.1006/ecss.2002.1036].

Emmerson M. C. et al. 2001 Consistent patterns and the idiosyncratic effects of biodiversity in marine ecosystems. Nature 411(6833): 73-77 [DOI: 10.1038/35075055] [PubMed: 11333979].

Lotze, H. K., Lenihan, H. S., Bourque, B. J., Bradbury, R. H., Cooke, R. G., Kay, M. C. et al. 2006 Depletion, degradation, and recovery potential of estuaries and coastal seas. Science 312: 1806-1809 [DOI: 10.1126/science.1128035] [PubMed: 16794081].

Rowntree, R.A. & K.W. Able. 2007. Spatial and temporal habitat use patterns for salt marsh nekton: implications for ecological functions. Aquatic Ecology 41: 25-45 [DOI: 10.1007/s10452-006-9052-4].

Williams S. L. and Grosholz, E. D. 2008 The invasive species challenge in estuarine and coastal environments: marrying management and science. Estuaries & Coasts 31: 3-20 [DOI: 10.1007/s12237-007-9031-6].

Chapter 6

Raffaelli, D. G. & Moller, H. 2000 Manipulative experiments in animal ecology:do they promise more than they can deliver? Advances in Ecological Research 30: 299-330. [DOI: 10.1016/S0065-2504(08)60020-3]

Chapter 7

Anonymous. 2004. Continuous plankton records: plankton atlas of the North Atlantic Ocean (1958-1999). Marine Ecology Progress Series 278. Supplement available on line at: http://www.int-res.com/abstracts/meps/CPRatlas/contents.html.

Steele, J. H. 2004 Regime shifts in the ocean: reconciling observations and theory. Progress in Oceanography 60: 135-41 [DOI: 10.1016/j.pocean.2004.02.004].

Chapter 8

Hall, S. J. 2002 The continental shelf benthic ecosystem: current status, agents for change and future prospects. Environmental Conservation 29: 350-74.

[DOI: 10.1017/S0376892902000243]

Snelgrove, P. & C. Butman. 1994. Animal-sediment relationships revisited: cause versus effect. Oceanography and Marine Biology: An Annual Review 32: 111-77.

Chapter 9

Levin, L.A., Etter, R.J., Rex, M.A., Gooday, A.J., Smith, C.R., Pineda et al. 2001 Environmental influences on regional deep-sea species diversity. Annual Review of Ecology and Systematics 32, 51-93 [DOI: 10.1146/annurev.ecolsys.32.081501.114002].

Martin, W., Baross, J., Kelley, D., & Russell, M.J. 2008 Hydrothermal vents and the origin of life. Nature Reviews Microbiology 6, 805-814 [PubMed: 18820700].

Rex, M.A. et al. 2006 Global bathymetric patterns of standing stock and body size in the deep-sea benthos. Marine Ecology Progress Series 317: 1-8 [DOI: 10.3354/meps317001].

Roberts J.M., Wheeler A.J., & Freiwald A. 2006 Reefs of the deep: the biology and geology of coldwater coral ecosystems. Science, 213: 543-547.

[DOI: 10.1126/science.1119861] Back to top

Chapter 10

Alongi, D.M. 2002 Present state and future of the world’s mangrove forests. Environmental Conservation 29: 331-349.

[DOI: 10.1017/S0376892902000231]

Duarte, C. M. 2002 The future of seagrass meadows. Environmental Conservation 29: 192-206.

[DOI: 10.1017/S0376892902000127]

Jackson, E., Rowden, A.A., Attrill, M.J., Bossey, S.J., & Jones, M.B. 2001 The importance of seagrass beds as a habitat for fishery species. Oceanography and Marine Biology: an Annual Review 39, 269-303.

[DOI: 10.4236/ns.2012.48069]

Molnar, J.L., Gamboa, R.L., Revenga, C., & Spalding, M.D. 2008 Assessing the global threat of invasive species to marine biodiversity. Frontiers in Ecology and the Environment 6: 485-492 [DOI: 10.1890/070064].

Ropert-Coudert, Y. & Wilson, R.P. 2005 Trends and perspectives in animal-attached remote sensing. Frontiers in Ecology and the Environment 3, 437-444 [DOI: 10.1890/1540-9295(2005)003[0437:TAPIAR]2.0.CO;2].

Chapter 12

Arntz, W. E., Brey, T., & Gallardo, V. A. 1994 Antarctic zoobenthos. Oceanography and Marine Biology, an Annual Review: 32: 241-304.

Brierley, A. S. & Thomas, D. N. 2002 Ecology of Southern Ocean pack-ice. Advances in Marine Biology: 43: 171-276 [DOI: 10.1016/S0065-2881(02)43005-2] [PubMed: 12154613].

Smetacek, V. & Nicol S. 2005 Polar ocean ecosystems in a changing world. Nature: 437: 362-368 [DOI: 10.1038/nature04161] [PubMed: 16163347].

Chapter 14

Black, K. D. 2001 Environmental Impacts of Aquaculture. Sheffield Academic Press, Sheffield.

[DOI: 10.1002/aqc.504]

Hilborn, R. 1992 Hatcheries and the future of salmon in the Northwest. Fisheries 17: 5-8 [DOI: 10.1577/1548-8446(1992)017].

Hilborn, R. 1999 Confession of a reformed hatchery basher. Fisheries 24: 30-31.

[DOI: 10.1577/1548-8446-24-5]

Naylor, R. L., Goldburg, R., Primavera, J., Kautsky, N., Beveridge, M. C. M., Clay, J., Folke, C., Lubchenco, J., Mooney, H. A., & Troell, M. 2000 Effect of aquaculture on world fish supply. Nature 405: 1017-24 [DOI: 10.1038/35016500] [PubMed: 10890435].

Chapter 15

Evans, S. M., Birchenough, A. C., & Brancato, M. S. 2000 The TBT ban: out of the frying pan into the fire? Marine Pollution Bulletin 40: 204-211 [DOI: 10.1016/S0025-326X(99)00248-9].

Hall, S. J. 2002 The continental shelf benthic ecosystem: current status, agents for change and future prospects. Environmental Conservation 29: 350-374

[DOI: 10.1017/S0376892902000243] Back to top